WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK593.5c.1 Sequence Name  ZK593.5c.1
Length (nt)  3267   Chromosome Location  IV: 10926924-10931695
Chromosome . Primary Identifier  IV Chromosome Location . Start  10926924
Chromosome Location . End  10931695 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK593.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001017 dnc-1 ZK593.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK593.5c ZK593.5c 3267   IV: 10926924-10927070

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK593.5c.1 10926924 10931695 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142741   147   IV: 10926924-10927070 Caenorhabditis elegans
Exon142744   547   IV: 10927268-10927814 Caenorhabditis elegans
Exon142749   719   IV: 10928329-10929047 Caenorhabditis elegans
Exon142755   432   IV: 10929095-10929526 Caenorhabditis elegans
Exon142760   538   IV: 10929574-10930111 Caenorhabditis elegans
Exon142765   77   IV: 10930161-10930237 Caenorhabditis elegans
Exon142770   741   IV: 10930632-10931372 Caenorhabditis elegans
Exon142773   66   IV: 10931630-10931695 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK593.5c.1 10926924 10931695 -1

1 Sequence

Length
3267

1 Sequence Ontology Term

Identifier Name Description
transcript