WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK593.5e.1 Sequence Name  ZK593.5e.1
Length (nt)  4156   Chromosome Location  IV: 10926720-10933160
Chromosome . Primary Identifier  IV Chromosome Location . Start  10926720
Chromosome Location . End  10933160 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK593.5e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001017 dnc-1 ZK593.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK593.5e ZK593.5e 3897   IV: 10926924-10927070

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK593.5e.1 10926720 10933160 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142792   351   IV: 10926720-10927070 Caenorhabditis elegans
Exon142801   547   IV: 10927268-10927814 Caenorhabditis elegans
Exon142806   719   IV: 10928329-10929047 Caenorhabditis elegans
Exon142812   432   IV: 10929095-10929526 Caenorhabditis elegans
Exon142817   538   IV: 10929574-10930111 Caenorhabditis elegans
Exon142822   77   IV: 10930161-10930237 Caenorhabditis elegans
Exon142827   741   IV: 10930632-10931372 Caenorhabditis elegans
Exon142832   209   IV: 10931630-10931838 Caenorhabditis elegans
Exon142836   70   IV: 10931882-10931951 Caenorhabditis elegans
Exon142844   102   IV: 10932595-10932696 Caenorhabditis elegans
Exon142848   284   IV: 10932745-10933028 Caenorhabditis elegans
Exon142849   86   IV: 10933075-10933160 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK593.5e.1 10926720 10933160 -1

1 Sequence

Length
4156

1 Sequence Ontology Term

Identifier Name Description
transcript