WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK593.8.1 Sequence Name  ZK593.8.1
Length (nt)  1679   Chromosome Location  IV: 10937454-10939934
Chromosome . Primary Identifier  IV Chromosome Location . Start  10937454
Chromosome Location . End  10939934 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK593.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014004 fic-1 ZK593.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK593.8 ZK593.8 1527   IV: 10937472-10937550

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK593.8.1 10937454 10939934 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142807   97   IV: 10937454-10937550 Caenorhabditis elegans
Exon142808   138   IV: 10937595-10937732 Caenorhabditis elegans
Exon142809   439   IV: 10937797-10938235 Caenorhabditis elegans
Exon142810   123   IV: 10938834-10938956 Caenorhabditis elegans
Exon142811   625   IV: 10939003-10939627 Caenorhabditis elegans
Exon142812   257   IV: 10939678-10939934 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK593.8.1 10937454 10939934 1

1 Sequence

Length
1679

1 Sequence Ontology Term

Identifier Name Description
transcript