WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69E1A.8.1 Sequence Name  Y69E1A.8.1
Length (nt)  1216   Chromosome Location  IV: 10966604-10968166
Chromosome . Primary Identifier  IV Chromosome Location . Start  10966604
Chromosome Location . End  10968166 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69E1A.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013478 Y69E1A.8 Y69E1A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69E1A.8 Y69E1A.8 1095   IV: 10966670-10966751

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69E1A.8.1 10966604 10968166 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142889   148   IV: 10966604-10966751 Caenorhabditis elegans
Exon142890   58   IV: 10966800-10966857 Caenorhabditis elegans
Exon142891   236   IV: 10967012-10967247 Caenorhabditis elegans
Exon142892   252   IV: 10967294-10967545 Caenorhabditis elegans
Exon142893   327   IV: 10967597-10967923 Caenorhabditis elegans
Exon142894   195   IV: 10967972-10968166 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69E1A.8.1 10966604 10968166 1

1 Sequence

Length
1216

1 Sequence Ontology Term

Identifier Name Description
transcript