WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43E12A.1.1 Sequence Name  Y43E12A.1.1
Length (nt)  1268   Chromosome Location  IV: 10985985-10987426
Chromosome . Primary Identifier  IV Chromosome Location . Start  10985985
Chromosome Location . End  10987426 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43E12A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000866 cyb-2.1 Y43E12A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43E12A.1 Y43E12A.1 954   IV: 10986002-10986339

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43E12A.1.1 10985985 10987426 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142908   355   IV: 10985985-10986339 Caenorhabditis elegans
Exon142909   387   IV: 10986428-10986814 Caenorhabditis elegans
Exon142910   103   IV: 10986859-10986961 Caenorhabditis elegans
Exon142911   423   IV: 10987004-10987426 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43E12A.1.1 10985985 10987426 1

1 Sequence

Length
1268

1 Sequence Ontology Term

Identifier Name Description
transcript