WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43E12A.3c.1 Sequence Name  Y43E12A.3c.1
Length (nt)  906   Chromosome Location  IV: 10987908-10989055
Chromosome . Primary Identifier  IV Chromosome Location . Start  10987908
Chromosome Location . End  10989055 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43E12A.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012795 Y43E12A.3 Y43E12A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43E12A.3c Y43E12A.3c 906   IV: 10987908-10988174

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43E12A.3c.1 10987908 10989055 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142913   267   IV: 10987908-10988174 Caenorhabditis elegans
Exon142915   75   IV: 10988220-10988294 Caenorhabditis elegans
Exon142918   117   IV: 10988347-10988463 Caenorhabditis elegans
Exon142920   154   IV: 10988513-10988666 Caenorhabditis elegans
Exon142923   173   IV: 10988710-10988882 Caenorhabditis elegans
Exon142925   120   IV: 10988936-10989055 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43E12A.3c.1 10987908 10989055 1

1 Sequence

Length
906

1 Sequence Ontology Term

Identifier Name Description
transcript