WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13H10.3d.1 Sequence Name  F13H10.3d.1
Length (nt)  2221   Chromosome Location  IV: 11012113-11015754
Chromosome . Primary Identifier  IV Chromosome Location . Start  11012113
Chromosome Location . End  11015754 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13H10.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008774 F13H10.3 F13H10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13H10.3d F13H10.3d 1758   IV: 11012513-11012678

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13H10.3d.1 11012113 11015754 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142967   566   IV: 11012113-11012678 Caenorhabditis elegans
Exon142972   239   IV: 11012724-11012962 Caenorhabditis elegans
Exon142976   212   IV: 11013486-11013697 Caenorhabditis elegans
Exon142980   99   IV: 11013749-11013847 Caenorhabditis elegans
Exon142984   228   IV: 11013908-11014135 Caenorhabditis elegans
Exon142988   240   IV: 11014225-11014464 Caenorhabditis elegans
Exon142992   158   IV: 11014519-11014676 Caenorhabditis elegans
Exon142996   104   IV: 11014725-11014828 Caenorhabditis elegans
Exon143000   274   IV: 11014871-11015144 Caenorhabditis elegans
Exon143004   101   IV: 11015654-11015754 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13H10.3d.1 11012113 11015754 -1

1 Sequence

Length
2221

1 Sequence Ontology Term

Identifier Name Description
transcript