WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13H10.3c.1 Sequence Name  F13H10.3c.1
Length (nt)  1752   Chromosome Location  IV: 11012513-11015691
Chromosome . Primary Identifier  IV Chromosome Location . Start  11012513
Chromosome Location . End  11015691 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13H10.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008774 F13H10.3 F13H10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13H10.3c F13H10.3c 1752   IV: 11012513-11012678

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13H10.3c.1 11012513 11015691 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142968   166   IV: 11012513-11012678 Caenorhabditis elegans
Exon142971   239   IV: 11012724-11012962 Caenorhabditis elegans
Exon142975   212   IV: 11013486-11013697 Caenorhabditis elegans
Exon142979   99   IV: 11013749-11013847 Caenorhabditis elegans
Exon142983   228   IV: 11013908-11014135 Caenorhabditis elegans
Exon142987   240   IV: 11014225-11014464 Caenorhabditis elegans
Exon142991   158   IV: 11014519-11014676 Caenorhabditis elegans
Exon142994   98   IV: 11014725-11014822 Caenorhabditis elegans
Exon142999   274   IV: 11014871-11015144 Caenorhabditis elegans
Exon143001   38   IV: 11015654-11015691 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13H10.3c.1 11012513 11015691 -1

1 Sequence

Length
1752

1 Sequence Ontology Term

Identifier Name Description
transcript