WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13H10.4c.1 Sequence Name  F13H10.4c.1
Length (nt)  2571   Chromosome Location  IV: 11016229-11019716
Chromosome . Primary Identifier  IV Chromosome Location . Start  11016229
Chromosome Location . End  11019716 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13H10.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008775 mogs-1 F13H10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13H10.4c F13H10.4c 2379   IV: 11016421-11016549

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13H10.4c.1 11016229 11019716 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143030   321   IV: 11016229-11016549 Caenorhabditis elegans
Exon143034   398   IV: 11016599-11016996 Caenorhabditis elegans
Exon143038   436   IV: 11017621-11018056 Caenorhabditis elegans
Exon143042   529   IV: 11018103-11018631 Caenorhabditis elegans
Exon143046   128   IV: 11018673-11018800 Caenorhabditis elegans
Exon143050   383   IV: 11018868-11019250 Caenorhabditis elegans
Exon143054   145   IV: 11019299-11019443 Caenorhabditis elegans
Exon143058   231   IV: 11019486-11019716 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13H10.4c.1 11016229 11019716 -1

1 Sequence

Length
2571

1 Sequence Ontology Term

Identifier Name Description
transcript