WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36H1.2i.1 Sequence Name  F36H1.2i.1
Length (nt)  4939   Chromosome Location  IV: 11038660-11047422
Chromosome . Primary Identifier  IV Chromosome Location . Start  11038660
Chromosome Location . End  11047422 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H1.2i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006490 kdin-1 F36H1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H1.2i F36H1.2i 4311   IV: 11038886-11038999

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36H1.2i.1 11038660 11047422 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143088   340   IV: 11038660-11038999 Caenorhabditis elegans
Exon143100   66   IV: 11039284-11039349 Caenorhabditis elegans
Exon143108   102   IV: 11039395-11039496 Caenorhabditis elegans
Exon143116   174   IV: 11039628-11039801 Caenorhabditis elegans
Exon143124   108   IV: 11039850-11039957 Caenorhabditis elegans
Exon143132   117   IV: 11040115-11040231 Caenorhabditis elegans
Exon143140   197   IV: 11040279-11040475 Caenorhabditis elegans
Exon143148   100   IV: 11040523-11040622 Caenorhabditis elegans
Exon143156   99   IV: 11040670-11040768 Caenorhabditis elegans
Exon143164   166   IV: 11041199-11041364 Caenorhabditis elegans
Exon143172   180   IV: 11041416-11041595 Caenorhabditis elegans
Exon143180   139   IV: 11041644-11041782 Caenorhabditis elegans
Exon143188   202   IV: 11041839-11042040 Caenorhabditis elegans
Exon143196   107   IV: 11042096-11042202 Caenorhabditis elegans
Exon143204   146   IV: 11042288-11042433 Caenorhabditis elegans
Exon143216   311   IV: 11042929-11043239 Caenorhabditis elegans
Exon143224   238   IV: 11043286-11043523 Caenorhabditis elegans
Exon143232   206   IV: 11043567-11043772 Caenorhabditis elegans
Exon143236   570   IV: 11043817-11044386 Caenorhabditis elegans
Exon143248   490   IV: 11044443-11044932 Caenorhabditis elegans
Exon143256   121   IV: 11044983-11045103 Caenorhabditis elegans
Exon143265   156   IV: 11045924-11046079 Caenorhabditis elegans
Exon143277   115   IV: 11046474-11046588 Caenorhabditis elegans
Exon143285   489   IV: 11046934-11047422 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36H1.2i.1 11038660 11047422 1

1 Sequence

Length
4939

1 Sequence Ontology Term

Identifier Name Description
transcript