WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36H1.3.1 Sequence Name  F36H1.3.1
Length (nt)  1758   Chromosome Location  IV: 11050128-11052501
Chromosome . Primary Identifier  IV Chromosome Location . Start  11050128
Chromosome Location . End  11052501 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009492 F36H1.3 F36H1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H1.3 F36H1.3 1599   IV: 11050216-11050236

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36H1.3.1 11050128 11052501 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143289   109   IV: 11050128-11050236 Caenorhabditis elegans
Exon143290   69   IV: 11050290-11050358 Caenorhabditis elegans
Exon143291   118   IV: 11050405-11050522 Caenorhabditis elegans
Exon143292   131   IV: 11050568-11050698 Caenorhabditis elegans
Exon143293   133   IV: 11050923-11051055 Caenorhabditis elegans
Exon143294   388   IV: 11051103-11051490 Caenorhabditis elegans
Exon143295   200   IV: 11051535-11051734 Caenorhabditis elegans
Exon143296   182   IV: 11051781-11051962 Caenorhabditis elegans
Exon143297   312   IV: 11052027-11052338 Caenorhabditis elegans
Exon143298   116   IV: 11052386-11052501 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36H1.3.1 11050128 11052501 1

1 Sequence

Length
1758

1 Sequence Ontology Term

Identifier Name Description
transcript