WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36H1.4g.1 Sequence Name  F36H1.4g.1
Length (nt)  1549   Chromosome Location  IV: 11054308-11063171
Chromosome . Primary Identifier  IV Chromosome Location . Start  11054308
Chromosome Location . End  11063171 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H1.4g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002992 lin-3 F36H1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H1.4g F36H1.4g 1395   IV: 11057814-11057868

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36H1.4g.1 11054308 11063171 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143326   61   IV: 11054308-11054368 Caenorhabditis elegans
Exon143333   68   IV: 11057670-11057737 Caenorhabditis elegans
Exon143342   80   IV: 11057789-11057868 Caenorhabditis elegans
Exon143349   246   IV: 11059399-11059644 Caenorhabditis elegans
Exon143366   165   IV: 11059693-11059857 Caenorhabditis elegans
Exon143377   82   IV: 11060409-11060490 Caenorhabditis elegans
Exon143382   82   IV: 11060538-11060619 Caenorhabditis elegans
Exon143393   123   IV: 11060828-11060950 Caenorhabditis elegans
Exon143402   89   IV: 11061068-11061156 Caenorhabditis elegans
Exon143413   276   IV: 11061624-11061899 Caenorhabditis elegans
Exon143424   112   IV: 11061947-11062058 Caenorhabditis elegans
Exon143435   87   IV: 11062114-11062200 Caenorhabditis elegans
Exon143441   78   IV: 11063094-11063171 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36H1.4g.1 11054308 11063171 1

1 Sequence

Length
1549

1 Sequence Ontology Term

Identifier Name Description
transcript