WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36H1.4b.1 Sequence Name  F36H1.4b.1
Length (nt)  1790   Chromosome Location  IV: 11057670-11063557
Chromosome . Primary Identifier  IV Chromosome Location . Start  11057670
Chromosome Location . End  11063557 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H1.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002992 lin-3 F36H1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H1.4b F36H1.4b 1311   IV: 11057814-11057868

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36H1.4b.1 11057670 11063557 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143314   68   IV: 11057670-11057737 Caenorhabditis elegans
Exon143317   80   IV: 11057789-11057868 Caenorhabditis elegans
Exon143329   240   IV: 11059405-11059644 Caenorhabditis elegans
Exon143338   165   IV: 11059693-11059857 Caenorhabditis elegans
Exon143349   82   IV: 11060409-11060490 Caenorhabditis elegans
Exon143365   127   IV: 11060538-11060664 Caenorhabditis elegans
Exon143374   89   IV: 11061068-11061156 Caenorhabditis elegans
Exon143385   276   IV: 11061624-11061899 Caenorhabditis elegans
Exon143396   112   IV: 11061947-11062058 Caenorhabditis elegans
Exon143407   87   IV: 11062114-11062200 Caenorhabditis elegans
Exon143421   464   IV: 11063094-11063557 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36H1.4b.1 11057670 11063557 1

1 Sequence

Length
1790

1 Sequence Ontology Term

Identifier Name Description
transcript