WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36H1.4a.1 Sequence Name  F36H1.4a.1
Length (nt)  2035   Chromosome Location  IV: 11054310-11063737
Chromosome . Primary Identifier  IV Chromosome Location . Start  11054310
Chromosome Location . End  11063737 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H1.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002992 lin-3 F36H1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H1.4a F36H1.4a 1317   IV: 11057814-11057868

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36H1.4a.1 11054310 11063737 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143327   59   IV: 11054310-11054368 Caenorhabditis elegans
Exon143330   68   IV: 11057670-11057737 Caenorhabditis elegans
Exon143337   80   IV: 11057789-11057868 Caenorhabditis elegans
Exon143347   246   IV: 11059399-11059644 Caenorhabditis elegans
Exon143358   165   IV: 11059693-11059857 Caenorhabditis elegans
Exon143369   82   IV: 11060409-11060490 Caenorhabditis elegans
Exon143385   127   IV: 11060538-11060664 Caenorhabditis elegans
Exon143394   89   IV: 11061068-11061156 Caenorhabditis elegans
Exon143405   276   IV: 11061624-11061899 Caenorhabditis elegans
Exon143416   112   IV: 11061947-11062058 Caenorhabditis elegans
Exon143427   87   IV: 11062114-11062200 Caenorhabditis elegans
Exon143446   644   IV: 11063094-11063737 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36H1.4a.1 11054310 11063737 1

1 Sequence

Length
2035

1 Sequence Ontology Term

Identifier Name Description
transcript