WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36H1.4d.1 Sequence Name  F36H1.4d.1
Length (nt)  2085   Chromosome Location  IV: 11057664-11063768
Chromosome . Primary Identifier  IV Chromosome Location . Start  11057664
Chromosome Location . End  11063768 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H1.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002992 lin-3 F36H1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H1.4d F36H1.4d 1389   IV: 11057814-11057868

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36H1.4d.1 11057664 11063768 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143329   74   IV: 11057664-11057737 Caenorhabditis elegans
Exon143341   80   IV: 11057789-11057868 Caenorhabditis elegans
Exon143353   240   IV: 11059405-11059644 Caenorhabditis elegans
Exon143363   165   IV: 11059693-11059857 Caenorhabditis elegans
Exon143374   82   IV: 11060409-11060490 Caenorhabditis elegans
Exon143381   82   IV: 11060538-11060619 Caenorhabditis elegans
Exon143391   123   IV: 11060828-11060950 Caenorhabditis elegans
Exon143399   89   IV: 11061068-11061156 Caenorhabditis elegans
Exon143410   276   IV: 11061624-11061899 Caenorhabditis elegans
Exon143421   112   IV: 11061947-11062058 Caenorhabditis elegans
Exon143432   87   IV: 11062114-11062200 Caenorhabditis elegans
Exon143448   675   IV: 11063094-11063768 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36H1.4d.1 11057664 11063768 1

1 Sequence

Length
2085

1 Sequence Ontology Term

Identifier Name Description
transcript