WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y5F2A.1 Sequence Name  Y5F2A.1
Length (nt)  399   Chromosome Location  IV: 11063622-11063738
Chromosome . Primary Identifier  IV Chromosome Location . Start  11063622
Chromosome Location . End  11063738
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y5F2A.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19022 TTR-16 14.7 132 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00001663
WBRNAi00057789
WBRNAi00021182
WBRNAi00037642

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y5F2A.1 11063622 11063738 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012382 ttr-16 Y5F2A.1 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y5F2A.1 11063622 11063738 -1
CDS:Y5F2A.1 11063785 11063918 -1
CDS:Y5F2A.1 11063967 11064114 -1

1 Sequence

Length
399

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y5F2A.1.1 Y5F2A.1.1 514   IV: 11063530-11064137