WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y5F2A.2 Sequence Name  Y5F2A.2
Length (nt)  396   Chromosome Location  IV: 11066081-11066197
Chromosome . Primary Identifier  IV Chromosome Location . Start  11066081
Chromosome Location . End  11066197
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y5F2A.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19023 TTR-17 14.8 131 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00057790
WBRNAi00021183
WBRNAi00037643

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y5F2A.2 11066081 11066197 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012383 ttr-17 Y5F2A.2 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y5F2A.2 11066081 11066197 -1
CDS:Y5F2A.2 11066700 11066830 -1
CDS:Y5F2A.2 11066877 11067024 -1

1 Sequence

Length
396

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y5F2A.2.1 Y5F2A.2.1 460   IV: 11066019-11067026