WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M7.3.1 Sequence Name  M7.3.1
Length (nt)  2056   Chromosome Location  IV: 11086074-11092552
Chromosome . Primary Identifier  IV Chromosome Location . Start  11086074
Chromosome Location . End  11092552 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M7.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000246 bcc-1 M7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M7.3 M7.3 1935   IV: 11086191-11086231

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M7.3.1 11086074 11092552 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143472   158   IV: 11086074-11086231 Caenorhabditis elegans
Exon143473   100   IV: 11086313-11086412 Caenorhabditis elegans
Exon143474   143   IV: 11086458-11086600 Caenorhabditis elegans
Exon143475   145   IV: 11086647-11086791 Caenorhabditis elegans
Exon143476   187   IV: 11086838-11087024 Caenorhabditis elegans
Exon143477   154   IV: 11087658-11087811 Caenorhabditis elegans
Exon143478   127   IV: 11087876-11088002 Caenorhabditis elegans
Exon143479   123   IV: 11088057-11088179 Caenorhabditis elegans
Exon143480   115   IV: 11088230-11088344 Caenorhabditis elegans
Exon143481   89   IV: 11089050-11089138 Caenorhabditis elegans
Exon143482   198   IV: 11089189-11089386 Caenorhabditis elegans
Exon143483   76   IV: 11089436-11089511 Caenorhabditis elegans
Exon143484   137   IV: 11089556-11089692 Caenorhabditis elegans
Exon143491   206   IV: 11091853-11092058 Caenorhabditis elegans
Exon143492   98   IV: 11092455-11092552 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M7.3.1 11086074 11092552 -1

1 Sequence

Length
2056

1 Sequence Ontology Term

Identifier Name Description
transcript