WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M7.13.1 Sequence Name  M7.13.1
Length (nt)  1059   Chromosome Location  IV: 11098448-11100371
Chromosome . Primary Identifier  IV Chromosome Location . Start  11098448
Chromosome Location . End  11100371 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M7.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006071 str-3 M7.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M7.13 M7.13 1059   IV: 11098448-11098548

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M7.13.1 11098448 11100371 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143504   101   IV: 11098448-11098548 Caenorhabditis elegans
Exon143505   307   IV: 11098606-11098912 Caenorhabditis elegans
Exon143506   277   IV: 11099561-11099837 Caenorhabditis elegans
Exon143507   79   IV: 11099893-11099971 Caenorhabditis elegans
Exon143508   88   IV: 11100012-11100099 Caenorhabditis elegans
Exon143509   207   IV: 11100165-11100371 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M7.13.1 11098448 11100371 -1

1 Sequence

Length
1059

1 Sequence Ontology Term

Identifier Name Description
transcript