WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05E11.1 Sequence Name  T05E11.1
Length (nt)  633   Chromosome Location  IV: 11110216-11110383
Chromosome . Primary Identifier  IV Chromosome Location . Start  11110216
Chromosome Location . End  11110383
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05E11.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE06360 RPS-5 23.1 210 Caenorhabditis elegans
 

Other

26 RNAi

WormBase ID
WBRNAi00095711
WBRNAi00078654
WBRNAi00094323
WBRNAi00085538
WBRNAi00009117
WBRNAi00026193
WBRNAi00094059
WBRNAi00064934
WBRNAi00093761
WBRNAi00111118
WBRNAi00078559
WBRNAi00035201
WBRNAi00052509
WBRNAi00094439
WBRNAi00095892
WBRNAi00095969
WBRNAi00096044
WBRNAi00096121
WBRNAi00096198
WBRNAi00096275
WBRNAi00096370
WBRNAi00096453
WBRNAi00096536
WBRNAi00096635
WBRNAi00079169
WBRNAi00079210

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05E11.1 11110216 11110383 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004474 rps-5 T05E11.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05E11.1 11110216 11110383 -1
CDS:T05E11.1 11110432 11110560 -1
CDS:T05E11.1 11110612 11110881 -1
CDS:T05E11.1 11110979 11111044 -1

1 Sequence

Length
633

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05E11.1.1 T05E11.1.1 693   IV: 11110157-11111045