WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05E11.3a.2 Sequence Name  T05E11.3a.2
Length (nt)  2488   Chromosome Location  IV: 11119344-11123125
Chromosome . Primary Identifier  IV Chromosome Location . Start  11119344
Chromosome Location . End  11123125 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05E11.3a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011480 enpl-1 T05E11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05E11.3a T05E11.3a 2283   IV: 11119451-11119496

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05E11.3a.2 11119344 11123125 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143549   153   IV: 11119344-11119496 Caenorhabditis elegans
Exon143551   70   IV: 11119714-11119783 Caenorhabditis elegans
Exon143553   1018   IV: 11120632-11121649 Caenorhabditis elegans
Exon143556   576   IV: 11121724-11122299 Caenorhabditis elegans
Exon143559   587   IV: 11122366-11122952 Caenorhabditis elegans
Exon143561   84   IV: 11123042-11123125 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05E11.3a.2 11119344 11123125 1

1 Sequence

Length
2488

1 Sequence Ontology Term

Identifier Name Description
transcript