WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F01G4.2a.1 Sequence Name  F01G4.2a.1
Length (nt)  936   Chromosome Location  IV: 11131279-11133805
Chromosome . Primary Identifier  IV Chromosome Location . Start  11131279
Chromosome Location . End  11133805 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01G4.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000181 ard-1 F01G4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01G4.2a F01G4.2a 777   IV: 11131293-11131316

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F01G4.2a.1 11131279 11133805 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143583   38   IV: 11131279-11131316 Caenorhabditis elegans
Exon143584   159   IV: 11131400-11131558 Caenorhabditis elegans
Exon143585   165   IV: 11132341-11132505 Caenorhabditis elegans
Exon143586   138   IV: 11132553-11132690 Caenorhabditis elegans
Exon143587   141   IV: 11133320-11133460 Caenorhabditis elegans
Exon143590   295   IV: 11133511-11133805 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F01G4.2a.1 11131279 11133805 1

1 Sequence

Length
936

1 Sequence Ontology Term

Identifier Name Description
transcript