WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05E11.5.1 Sequence Name  T05E11.5.1
Length (nt)  1755   Chromosome Location  IV: 11116732-11118887
Chromosome . Primary Identifier  IV Chromosome Location . Start  11116732
Chromosome Location . End  11118887 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05E11.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011481 imp-2 T05E11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05E11.5 T05E11.5 1407   IV: 11117056-11117583

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05E11.5.1 11116732 11118887 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143600   852   IV: 11116732-11117583 Caenorhabditis elegans
Exon143601   810   IV: 11117864-11118673 Caenorhabditis elegans
Exon143602   93   IV: 11118795-11118887 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05E11.5.1 11116732 11118887 -1

1 Sequence

Length
1755

1 Sequence Ontology Term

Identifier Name Description
transcript