WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08F8.2b.1 Sequence Name  C08F8.2b.1
Length (nt)  2392   Chromosome Location  IV: 11150997-11154334
Chromosome . Primary Identifier  IV Chromosome Location . Start  11150997
Chromosome Location . End  11154334 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08F8.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007444 C08F8.2 C08F8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08F8.2b C08F8.2b 2160   IV: 11150997-11151221

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08F8.2b.1 11150997 11154334 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143654   225   IV: 11150997-11151221 Caenorhabditis elegans
Exon143655   240   IV: 11151293-11151532 Caenorhabditis elegans
Exon143656   155   IV: 11151578-11151732 Caenorhabditis elegans
Exon143657   120   IV: 11151779-11151898 Caenorhabditis elegans
Exon143658   79   IV: 11151948-11152026 Caenorhabditis elegans
Exon143659   90   IV: 11152434-11152523 Caenorhabditis elegans
Exon143661   141   IV: 11152567-11152707 Caenorhabditis elegans
Exon143663   302   IV: 11152753-11153054 Caenorhabditis elegans
Exon143665   85   IV: 11153100-11153184 Caenorhabditis elegans
Exon143667   284   IV: 11153238-11153521 Caenorhabditis elegans
Exon143669   103   IV: 11153568-11153670 Caenorhabditis elegans
Exon143671   111   IV: 11153722-11153832 Caenorhabditis elegans
Exon143674   457   IV: 11153878-11154334 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08F8.2b.1 11150997 11154334 1

1 Sequence

Length
2392

1 Sequence Ontology Term

Identifier Name Description
transcript