WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08F8.4c.1 Sequence Name  C08F8.4c.1
Length (nt)  1557   Chromosome Location  IV: 11157099-11159477
Chromosome . Primary Identifier  IV Chromosome Location . Start  11157099
Chromosome Location . End  11159477 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08F8.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007446 mboa-4 C08F8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08F8.4c C08F8.4c 1491   IV: 11157149-11157226

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08F8.4c.1 11157099 11159477 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143684   128   IV: 11157099-11157226 Caenorhabditis elegans
Exon143687   130   IV: 11157485-11157614 Caenorhabditis elegans
Exon143689   152   IV: 11157661-11157812 Caenorhabditis elegans
Exon143691   201   IV: 11157880-11158080 Caenorhabditis elegans
Exon143693   107   IV: 11158125-11158231 Caenorhabditis elegans
Exon143695   295   IV: 11158281-11158575 Caenorhabditis elegans
Exon143697   90   IV: 11158735-11158824 Caenorhabditis elegans
Exon143699   115   IV: 11158866-11158980 Caenorhabditis elegans
Exon143701   78   IV: 11159031-11159108 Caenorhabditis elegans
Exon143703   140   IV: 11159152-11159291 Caenorhabditis elegans
Exon143704   121   IV: 11159357-11159477 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08F8.4c.1 11157099 11159477 -1

1 Sequence

Length
1557

1 Sequence Ontology Term

Identifier Name Description
transcript