WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07H5.3c.1 Sequence Name  R07H5.3c.1
Length (nt)  663   Chromosome Location  IV: 11185026-11185923
Chromosome . Primary Identifier  IV Chromosome Location . Start  11185026
Chromosome Location . End  11185923 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07H5.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011123 nuaf-3 R07H5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07H5.3c R07H5.3c 663   IV: 11185026-11185138

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07H5.3c.1 11185026 11185923 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143773   113   IV: 11185026-11185138 Caenorhabditis elegans
Exon143775   156   IV: 11185187-11185342 Caenorhabditis elegans
Exon143777   64   IV: 11185388-11185451 Caenorhabditis elegans
Exon143779   138   IV: 11185500-11185637 Caenorhabditis elegans
Exon143781   114   IV: 11185688-11185801 Caenorhabditis elegans
Exon143782   78   IV: 11185846-11185923 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07H5.3c.1 11185026 11185923 1

1 Sequence

Length
663

1 Sequence Ontology Term

Identifier Name Description
transcript