WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07H5.4.1 Sequence Name  R07H5.4.1
Length (nt)  704   Chromosome Location  IV: 11187029-11188264
Chromosome . Primary Identifier  IV Chromosome Location . Start  11187029
Chromosome Location . End  11188264 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07H5.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011124 sdz-27 R07H5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07H5.4 R07H5.4 621   IV: 11187057-11187116

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07H5.4.1 11187029 11188264 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143784   88   IV: 11187029-11187116 Caenorhabditis elegans
Exon143785   114   IV: 11187166-11187279 Caenorhabditis elegans
Exon143786   502   IV: 11187763-11188264 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07H5.4.1 11187029 11188264 1

1 Sequence

Length
704

1 Sequence Ontology Term

Identifier Name Description
transcript