WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07H5.9.1 Sequence Name  R07H5.9.1
Length (nt)  1059   Chromosome Location  IV: 11207486-11209361
Chromosome . Primary Identifier  IV Chromosome Location . Start  11207486
Chromosome Location . End  11209361 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07H5.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011129 R07H5.9 R07H5.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07H5.9 R07H5.9 852   IV: 11207528-11207566

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07H5.9.1 11207486 11209361 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143803   81   IV: 11207486-11207566 Caenorhabditis elegans
Exon143804   36   IV: 11207616-11207651 Caenorhabditis elegans
Exon143805   83   IV: 11207704-11207786 Caenorhabditis elegans
Exon143806   86   IV: 11207834-11207919 Caenorhabditis elegans
Exon143807   49   IV: 11207965-11208013 Caenorhabditis elegans
Exon143808   58   IV: 11208058-11208115 Caenorhabditis elegans
Exon143809   62   IV: 11208492-11208553 Caenorhabditis elegans
Exon143810   181   IV: 11208599-11208779 Caenorhabditis elegans
Exon143811   68   IV: 11208841-11208908 Caenorhabditis elegans
Exon143812   213   IV: 11208953-11209165 Caenorhabditis elegans
Exon143813   142   IV: 11209220-11209361 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07H5.9.1 11207486 11209361 1

1 Sequence

Length
1059

1 Sequence Ontology Term

Identifier Name Description
transcript