WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07H5.10b.1 Sequence Name  R07H5.10b.1
Length (nt)  816   Chromosome Location  IV: 11213651-11218137
Chromosome . Primary Identifier  IV Chromosome Location . Start  11213651
Chromosome Location . End  11218137 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07H5.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011130 zip-6 R07H5.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07H5.10b R07H5.10b 816   IV: 11213651-11213723

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07H5.10b.1 11213651 11218137 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143823   73   IV: 11213651-11213723 Caenorhabditis elegans
Exon143825   245   IV: 11214270-11214514 Caenorhabditis elegans
Exon143827   290   IV: 11214561-11214850 Caenorhabditis elegans
Exon143828   156   IV: 11215044-11215199 Caenorhabditis elegans
Exon143830   52   IV: 11218086-11218137 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07H5.10b.1 11213651 11218137 -1

1 Sequence

Length
816

1 Sequence Ontology Term

Identifier Name Description
transcript