WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29F4.3.1 Sequence Name  C29F4.3.1
Length (nt)  1251   Chromosome Location  IV: 11222012-11223978
Chromosome . Primary Identifier  IV Chromosome Location . Start  11222012
Chromosome Location . End  11223978 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29F4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007809 C29F4.3 C29F4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29F4.3 C29F4.3 1173   IV: 11222048-11222348

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C29F4.3.1 11222012 11223978 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143888   337   IV: 11222012-11222348 Caenorhabditis elegans
Exon143889   121   IV: 11222393-11222513 Caenorhabditis elegans
Exon143890   256   IV: 11222558-11222813 Caenorhabditis elegans
Exon143891   187   IV: 11222860-11223046 Caenorhabditis elegans
Exon143892   175   IV: 11223089-11223263 Caenorhabditis elegans
Exon143893   175   IV: 11223804-11223978 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C29F4.3.1 11222012 11223978 -1

1 Sequence

Length
1251

1 Sequence Ontology Term

Identifier Name Description
transcript