WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54D1.5 Sequence Name  F54D1.5
Length (nt)  4221   Chromosome Location  IV: 11273495-11273574
Chromosome . Primary Identifier  IV Chromosome Location . Start  11273495
Chromosome Location . End  11273574
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D1.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40563 GTL-2 161.8 1406 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00001304
WBRNAi00048282
WBRNAi00015597
WBRNAi00109632
WBRNAi00109244
WBRNAi00109341
WBRNAi00109535
WBRNAi00109438

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54D1.5 11273495 11273574 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001796 gtl-2 F54D1.5 Caenorhabditis elegans

26 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54D1.5 11273495 11273574 1
CDS:F54D1.5 11274682 11274771 1
CDS:F54D1.5 11274824 11275285 1
CDS:F54D1.5 11275681 11275894 1
CDS:F54D1.5 11275950 11276212 1
CDS:F54D1.5 11276264 11276353 1
CDS:F54D1.5 11276400 11276616 1
CDS:F54D1.5 11276880 11277002 1
CDS:F54D1.5 11277057 11277143 1
CDS:F54D1.5 11277189 11277377 1
CDS:F54D1.5 11277427 11277644 1
CDS:F54D1.5 11277687 11277767 1
CDS:F54D1.5 11277809 11277970 1
CDS:F54D1.5 11278252 11278816 1
CDS:F54D1.5 11278866 11279054 1
CDS:F54D1.5 11280054 11280412 1
CDS:F54D1.5 11280457 11280528 1
CDS:F54D1.5 11280576 11280654 1
CDS:F54D1.5 11280814 11280859 1
CDS:F54D1.5 11280912 11281035 1
CDS:F54D1.5 11281097 11281154 1
CDS:F54D1.5 11281208 11281288 1
CDS:F54D1.5 11281332 11281402 1
CDS:F54D1.5 11281454 11281568 1
CDS:F54D1.5 11281614 11281702 1
CDS:F54D1.5 11281748 11281844 1

1 Sequence

Length
4221

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54D1.5.1 F54D1.5.1 4413   IV: 11273451-11281992