WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54D1.6 Sequence Name  F54D1.6
Length (nt)  4272   Chromosome Location  IV: 11287817-11288107
Chromosome . Primary Identifier  IV Chromosome Location . Start  11287817
Chromosome Location . End  11288107
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D1.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37523 F54D1.6 163.2 1423 Caenorhabditis elegans
 

Other

19 RNAi

WormBase ID
WBRNAi00048283
WBRNAi00099805
WBRNAi00100424
WBRNAi00025624
WBRNAi00071817
WBRNAi00090840
WBRNAi00100798
WBRNAi00099199
WBRNAi00071464
WBRNAi00099603
WBRNAi00099401
WBRNAi00008853
WBRNAi00100050
WBRNAi00100237
WBRNAi00070181
WBRNAi00103383
WBRNAi00100611
WBRNAi00100985
WBRNAi00110859

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54D1.6 11287817 11288107 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010047 F54D1.6 F54D1.6 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54D1.6 11287817 11288107 1
CDS:F54D1.6 11288156 11288290 1
CDS:F54D1.6 11288345 11288722 1
CDS:F54D1.6 11289302 11289394 1
CDS:F54D1.6 11289606 11289789 1
CDS:F54D1.6 11289849 11290333 1
CDS:F54D1.6 11290379 11290617 1
CDS:F54D1.6 11290669 11291052 1
CDS:F54D1.6 11291304 11291773 1
CDS:F54D1.6 11291822 11292028 1
CDS:F54D1.6 11292079 11292435 1
CDS:F54D1.6 11292483 11292666 1
CDS:F54D1.6 11292714 11292799 1
CDS:F54D1.6 11292851 11293057 1
CDS:F54D1.6 11293188 11293701 1
CDS:F54D1.6 11294262 11294319 1

1 Sequence

Length
4272

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54D1.6.1 F54D1.6.1 4655   IV: 11287811-11294696