WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0035.5.1 Sequence Name  B0035.5.1
Length (nt)  1745   Chromosome Location  IV: 11317419-11319951
Chromosome . Primary Identifier  IV Chromosome Location . Start  11317419
Chromosome Location . End  11319951 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0035.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007108 gspd-1 B0035.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0035.5 B0035.5 1569   IV: 11317421-11317546

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0035.5.1 11317419 11319951 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144062   128   IV: 11317419-11317546 Caenorhabditis elegans
Exon144063   207   IV: 11317600-11317806 Caenorhabditis elegans
Exon144064   76   IV: 11318223-11318298 Caenorhabditis elegans
Exon144065   253   IV: 11318343-11318595 Caenorhabditis elegans
Exon144066   302   IV: 11318654-11318955 Caenorhabditis elegans
Exon144067   138   IV: 11319017-11319154 Caenorhabditis elegans
Exon144068   202   IV: 11319207-11319408 Caenorhabditis elegans
Exon144069   177   IV: 11319460-11319636 Caenorhabditis elegans
Exon144070   262   IV: 11319690-11319951 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0035.5.1 11317419 11319951 1

1 Sequence

Length
1745

1 Sequence Ontology Term

Identifier Name Description
transcript