WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0035.12.1 Sequence Name  B0035.12.1
Length (nt)  2814   Chromosome Location  IV: 11329482-11332892
Chromosome . Primary Identifier  IV Chromosome Location . Start  11329482
Chromosome Location . End  11332892 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0035.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007111 sart-3 B0035.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0035.12 B0035.12 2511   IV: 11329764-11329879

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0035.12.1 11329482 11332892 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144093   398   IV: 11329482-11329879 Caenorhabditis elegans
Exon144096   295   IV: 11329932-11330226 Caenorhabditis elegans
Exon144098   114   IV: 11330276-11330389 Caenorhabditis elegans
Exon144100   338   IV: 11330447-11330784 Caenorhabditis elegans
Exon144102   602   IV: 11330832-11331433 Caenorhabditis elegans
Exon144104   149   IV: 11331493-11331641 Caenorhabditis elegans
Exon144106   398   IV: 11331790-11332187 Caenorhabditis elegans
Exon144108   97   IV: 11332232-11332328 Caenorhabditis elegans
Exon144110   169   IV: 11332370-11332538 Caenorhabditis elegans
Exon144112   149   IV: 11332589-11332737 Caenorhabditis elegans
Exon144114   105   IV: 11332788-11332892 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0035.12.1 11329482 11332892 -1

1 Sequence

Length
2814

1 Sequence Ontology Term

Identifier Name Description
transcript