WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0035.12.2 Sequence Name  B0035.12.2
Length (nt)  2854   Chromosome Location  IV: 11329491-11332969
Chromosome . Primary Identifier  IV Chromosome Location . Start  11329491
Chromosome Location . End  11332969 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0035.12.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007111 sart-3 B0035.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0035.12 B0035.12 2511   IV: 11329764-11329879

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0035.12.2 11329491 11332969 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144094   59   IV: 11329491-11329549 Caenorhabditis elegans
Exon144095   302   IV: 11329578-11329879 Caenorhabditis elegans
Exon144097   295   IV: 11329932-11330226 Caenorhabditis elegans
Exon144099   114   IV: 11330276-11330389 Caenorhabditis elegans
Exon144101   338   IV: 11330447-11330784 Caenorhabditis elegans
Exon144103   602   IV: 11330832-11331433 Caenorhabditis elegans
Exon144105   149   IV: 11331493-11331641 Caenorhabditis elegans
Exon144107   398   IV: 11331790-11332187 Caenorhabditis elegans
Exon144109   97   IV: 11332232-11332328 Caenorhabditis elegans
Exon144111   169   IV: 11332370-11332538 Caenorhabditis elegans
Exon144113   149   IV: 11332589-11332737 Caenorhabditis elegans
Exon144115   182   IV: 11332788-11332969 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0035.12.2 11329491 11332969 -1

1 Sequence

Length
2854

1 Sequence Ontology Term

Identifier Name Description
transcript