WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0035.11.1 Sequence Name  B0035.11.1
Length (nt)  1438   Chromosome Location  IV: 11327621-11329369
Chromosome . Primary Identifier  IV Chromosome Location . Start  11327621
Chromosome Location . End  11329369 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0035.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007110 leo-1 B0035.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0035.11 B0035.11 1293   IV: 11327766-11327905

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0035.11.1 11327621 11329369 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144141   285   IV: 11327621-11327905 Caenorhabditis elegans
Exon144142   331   IV: 11327976-11328306 Caenorhabditis elegans
Exon144143   100   IV: 11328359-11328458 Caenorhabditis elegans
Exon144144   95   IV: 11328507-11328601 Caenorhabditis elegans
Exon144145   174   IV: 11328649-11328822 Caenorhabditis elegans
Exon144146   397   IV: 11328870-11329266 Caenorhabditis elegans
Exon144147   56   IV: 11329314-11329369 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0035.11.1 11327621 11329369 -1

1 Sequence

Length
1438

1 Sequence Ontology Term

Identifier Name Description
transcript