WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01G1.1a.1 Sequence Name  T01G1.1a.1
Length (nt)  5001   Chromosome Location  IV: 11341327-11359863
Chromosome . Primary Identifier  IV Chromosome Location . Start  11341327
Chromosome Location . End  11359863 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01G1.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002223 klp-12 T01G1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01G1.1a T01G1.1a 4818   IV: 11341443-11341553

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01G1.1a.1 11341327 11359863 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144142   227   IV: 11341327-11341553 Caenorhabditis elegans
Exon144146   593   IV: 11341609-11342201 Caenorhabditis elegans
Exon144150   207   IV: 11342291-11342497 Caenorhabditis elegans
Exon144155   137   IV: 11342900-11343036 Caenorhabditis elegans
Exon144158   249   IV: 11343317-11343565 Caenorhabditis elegans
Exon144160   183   IV: 11344365-11344547 Caenorhabditis elegans
Exon144162   178   IV: 11345884-11346061 Caenorhabditis elegans
Exon144165   96   IV: 11346111-11346206 Caenorhabditis elegans
Exon144168   88   IV: 11346529-11346616 Caenorhabditis elegans
Exon144171   76   IV: 11350856-11350931 Caenorhabditis elegans
Exon144174   107   IV: 11351082-11351188 Caenorhabditis elegans
Exon144184   138   IV: 11355415-11355552 Caenorhabditis elegans
Exon144187   719   IV: 11355997-11356715 Caenorhabditis elegans
Exon144190   285   IV: 11356765-11357049 Caenorhabditis elegans
Exon144193   403   IV: 11357276-11357678 Caenorhabditis elegans
Exon144196   268   IV: 11357749-11358016 Caenorhabditis elegans
Exon144199   116   IV: 11358067-11358182 Caenorhabditis elegans
Exon144202   285   IV: 11358230-11358514 Caenorhabditis elegans
Exon144205   324   IV: 11358561-11358884 Caenorhabditis elegans
Exon144208   223   IV: 11359495-11359717 Caenorhabditis elegans
Exon144211   99   IV: 11359765-11359863 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01G1.1a.1 11341327 11359863 -1

1 Sequence

Length
5001

1 Sequence Ontology Term

Identifier Name Description
transcript