WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H02I12.1.1 Sequence Name  H02I12.1.1
Length (nt)  4221   Chromosome Location  IV: 11372991-11377627
Chromosome . Primary Identifier  IV Chromosome Location . Start  11372991
Chromosome Location . End  11377627 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H02I12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010351 cbd-1 H02I12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H02I12.1 H02I12.1 3960   IV: 11372994-11373039

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H02I12.1.1 11372991 11377627 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144237   49   IV: 11372991-11373039 Caenorhabditis elegans
Exon144238   95   IV: 11373087-11373181 Caenorhabditis elegans
Exon144239   556   IV: 11373227-11373782 Caenorhabditis elegans
Exon144240   609   IV: 11373829-11374437 Caenorhabditis elegans
Exon144241   921   IV: 11374484-11375404 Caenorhabditis elegans
Exon144242   279   IV: 11375453-11375731 Caenorhabditis elegans
Exon144243   336   IV: 11375779-11376114 Caenorhabditis elegans
Exon144244   428   IV: 11376163-11376590 Caenorhabditis elegans
Exon144245   333   IV: 11376637-11376969 Caenorhabditis elegans
Exon144246   615   IV: 11377013-11377627 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H02I12.1.1 11372991 11377627 1

1 Sequence

Length
4221

1 Sequence Ontology Term

Identifier Name Description
transcript