WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T01G1.3 Sequence Name  T01G1.3
Length (nt)  3252   Chromosome Location  IV: 11365938-11365991
Chromosome . Primary Identifier  IV Chromosome Location . Start  11365938
Chromosome Location . End  11365991
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01G1.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE16320 SEC-31 119.6 1083 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00052139
WBRNAi00092405
WBRNAi00017979
WBRNAi00080624
WBRNAi00080489

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T01G1.3 11365938 11365991 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011338 sec-31 T01G1.3 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:T01G1.3 11365938 11365991 -1
CDS:T01G1.3 11366130 11366249 -1
CDS:T01G1.3 11366297 11366565 -1
CDS:T01G1.3 11366612 11366852 -1
CDS:T01G1.3 11366903 11367055 -1
CDS:T01G1.3 11367102 11367359 -1
CDS:T01G1.3 11367407 11367561 -1
CDS:T01G1.3 11367609 11367863 -1
CDS:T01G1.3 11367911 11368383 -1
CDS:T01G1.3 11368429 11368523 -1
CDS:T01G1.3 11370283 11370670 -1
CDS:T01G1.3 11370776 11370948 -1
CDS:T01G1.3 11370994 11371210 -1
CDS:T01G1.3 11371259 11371453 -1
CDS:T01G1.3 11371500 11371639 -1
CDS:T01G1.3 11371687 11371752 -1

1 Sequence

Length
3252

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T01G1.3.1 T01G1.3.1 3609   IV: 11365621-11371792