WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22B3.4.1 Sequence Name  F22B3.4.1
Length (nt)  2317   Chromosome Location  IV: 11410485-11413001
Chromosome . Primary Identifier  IV Chromosome Location . Start  11410485
Chromosome Location . End  11413001 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22B3.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009035 gfat-2 F22B3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22B3.4 F22B3.4 2133   IV: 11410513-11411221

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22B3.4.1 11410485 11413001 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144281   737   IV: 11410485-11411221 Caenorhabditis elegans
Exon144282   332   IV: 11411270-11411601 Caenorhabditis elegans
Exon144284   843   IV: 11411653-11412495 Caenorhabditis elegans
Exon144286   204   IV: 11412544-11412747 Caenorhabditis elegans
Exon144288   201   IV: 11412801-11413001 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22B3.4.1 11410485 11413001 1

1 Sequence

Length
2317

1 Sequence Ontology Term

Identifier Name Description
transcript