WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22B3.7.1 Sequence Name  F22B3.7.1
Length (nt)  1140   Chromosome Location  IV: 11417581-11421796
Chromosome . Primary Identifier  IV Chromosome Location . Start  11417581
Chromosome Location . End  11421796 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22B3.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009038 F22B3.7 F22B3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22B3.7 F22B3.7 1140   IV: 11417581-11417668

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22B3.7.1 11417581 11421796 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144318   88   IV: 11417581-11417668 Caenorhabditis elegans
Exon144319   143   IV: 11417714-11417856 Caenorhabditis elegans
Exon144320   122   IV: 11417902-11418023 Caenorhabditis elegans
Exon144321   118   IV: 11418074-11418191 Caenorhabditis elegans
Exon144322   71   IV: 11418241-11418311 Caenorhabditis elegans
Exon144323   97   IV: 11418361-11418457 Caenorhabditis elegans
Exon144324   171   IV: 11418504-11418674 Caenorhabditis elegans
Exon144326   123   IV: 11421264-11421386 Caenorhabditis elegans
Exon144327   207   IV: 11421590-11421796 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22B3.7.1 11417581 11421796 -1

1 Sequence

Length
1140

1 Sequence Ontology Term

Identifier Name Description
transcript