WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22B3.8.1 Sequence Name  F22B3.8.1
Length (nt)  1583   Chromosome Location  IV: 11422677-11424930
Chromosome . Primary Identifier  IV Chromosome Location . Start  11422677
Chromosome Location . End  11424930 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22B3.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009039 F22B3.8 F22B3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22B3.8 F22B3.8 1494   IV: 11422721-11422789

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22B3.8.1 11422677 11424930 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144328   113   IV: 11422677-11422789 Caenorhabditis elegans
Exon144329   114   IV: 11422833-11422946 Caenorhabditis elegans
Exon144330   261   IV: 11422994-11423254 Caenorhabditis elegans
Exon144331   146   IV: 11423306-11423451 Caenorhabditis elegans
Exon144332   70   IV: 11423511-11423580 Caenorhabditis elegans
Exon144333   264   IV: 11423626-11423889 Caenorhabditis elegans
Exon144334   194   IV: 11423940-11424133 Caenorhabditis elegans
Exon144335   224   IV: 11424281-11424504 Caenorhabditis elegans
Exon144336   146   IV: 11424552-11424697 Caenorhabditis elegans
Exon144337   51   IV: 11424880-11424930 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22B3.8.1 11422677 11424930 -1

1 Sequence

Length
1583

1 Sequence Ontology Term

Identifier Name Description
transcript