WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22B3.5a.1 Sequence Name  F22B3.5a.1
Length (nt)  899   Chromosome Location  IV: 11415598-11416824
Chromosome . Primary Identifier  IV Chromosome Location . Start  11415598
Chromosome Location . End  11416824 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22B3.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009036 F22B3.5 F22B3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22B3.5a F22B3.5a 636   IV: 11415598-11415695

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22B3.5a.1 11415598 11416824 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144363   98   IV: 11415598-11415695 Caenorhabditis elegans
Exon144366   139   IV: 11415745-11415883 Caenorhabditis elegans
Exon144367   119   IV: 11416065-11416183 Caenorhabditis elegans
Exon144369   217   IV: 11416233-11416449 Caenorhabditis elegans
Exon144372   326   IV: 11416499-11416824 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22B3.5a.1 11415598 11416824 -1

1 Sequence

Length
899

1 Sequence Ontology Term

Identifier Name Description
transcript