WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22B3.5b.1 Sequence Name  F22B3.5b.1
Length (nt)  606   Chromosome Location  IV: 11415632-11416561
Chromosome . Primary Identifier  IV Chromosome Location . Start  11415632
Chromosome Location . End  11416561 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22B3.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009036 F22B3.5 F22B3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22B3.5b F22B3.5b 606   IV: 11415632-11415695

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22B3.5b.1 11415632 11416561 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144364   64   IV: 11415632-11415695 Caenorhabditis elegans
Exon144365   143   IV: 11415741-11415883 Caenorhabditis elegans
Exon144368   119   IV: 11416065-11416183 Caenorhabditis elegans
Exon144370   217   IV: 11416233-11416449 Caenorhabditis elegans
Exon144371   63   IV: 11416499-11416561 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22B3.5b.1 11415632 11416561 -1

1 Sequence

Length
606

1 Sequence Ontology Term

Identifier Name Description
transcript