WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10C6.1i.1 Sequence Name  C10C6.1i.1
Length (nt)  4707   Chromosome Location  IV: 11436647-11446645
Chromosome . Primary Identifier  IV Chromosome Location . Start  11436647
Chromosome Location . End  11446645 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10C6.1i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002192 kin-4 C10C6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10C6.1i C10C6.1i 4707   IV: 11436647-11436770

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C10C6.1i.1 11436647 11446645 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144375   124   IV: 11436647-11436770 Caenorhabditis elegans
Exon144385   394   IV: 11437512-11437905 Caenorhabditis elegans
Exon144387   139   IV: 11439147-11439285 Caenorhabditis elegans
Exon144407   179   IV: 11439494-11439672 Caenorhabditis elegans
Exon144418   277   IV: 11439723-11439999 Caenorhabditis elegans
Exon144429   186   IV: 11441214-11441399 Caenorhabditis elegans
Exon144440   214   IV: 11441857-11442070 Caenorhabditis elegans
Exon144451   167   IV: 11442118-11442284 Caenorhabditis elegans
Exon144462   371   IV: 11442331-11442701 Caenorhabditis elegans
Exon144473   153   IV: 11442754-11442906 Caenorhabditis elegans
Exon144484   139   IV: 11442959-11443097 Caenorhabditis elegans
Exon144495   238   IV: 11443143-11443380 Caenorhabditis elegans
Exon144506   152   IV: 11443431-11443582 Caenorhabditis elegans
Exon144517   153   IV: 11443628-11443780 Caenorhabditis elegans
Exon144528   447   IV: 11443827-11444273 Caenorhabditis elegans
Exon144539   786   IV: 11444785-11445570 Caenorhabditis elegans
Exon144549   269   IV: 11445640-11445908 Caenorhabditis elegans
Exon144555   319   IV: 11446327-11446645 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C10C6.1i.1 11436647 11446645 1

1 Sequence

Length
4707

1 Sequence Ontology Term

Identifier Name Description
transcript