WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H21P03.3a Sequence Name  H21P03.3a
Length (nt)  1290   Chromosome Location  IV: 11483229-11483414
Chromosome . Primary Identifier  IV Chromosome Location . Start  11483229
Chromosome Location . End  11483414
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H21P03.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44486 SMS-1, isoform a 48.4 429 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00049453
WBRNAi00016292
WBRNAi00076525
WBRNAi00033737

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H21P03.3a 11483229 11483414 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004892 sms-1 H21P03.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:H21P03.3a 11483229 11483414 -1
CDS:H21P03.3a 11483962 11484137 -1
CDS:H21P03.3a 11484421 11484710 -1
CDS:H21P03.3a 11485360 11485738 -1
CDS:H21P03.3a 11485899 11486108 -1
CDS:H21P03.3a 11487859 11487907 -1

1 Sequence

Length
1290

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H21P03.3a.1 H21P03.3a.1 1946   IV: 11482664-11487998