WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M04B2.5a.1 Sequence Name  M04B2.5a.1
Length (nt)  2263   Chromosome Location  IV: 11504716-11509723
Chromosome . Primary Identifier  IV Chromosome Location . Start  11504716
Chromosome Location . End  11509723 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M04B2.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006678 twk-25 M04B2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M04B2.5a M04B2.5a 2052   IV: 11504776-11504826

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M04B2.5a.1 11504716 11509723 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144678   111   IV: 11504716-11504826 Caenorhabditis elegans
Exon144680   139   IV: 11504870-11505008 Caenorhabditis elegans
Exon144682   128   IV: 11505054-11505181 Caenorhabditis elegans
Exon144685   74   IV: 11505531-11505604 Caenorhabditis elegans
Exon144686   109   IV: 11506442-11506550 Caenorhabditis elegans
Exon144688   33   IV: 11506603-11506635 Caenorhabditis elegans
Exon144690   109   IV: 11506682-11506790 Caenorhabditis elegans
Exon144692   165   IV: 11507039-11507203 Caenorhabditis elegans
Exon144694   143   IV: 11507249-11507391 Caenorhabditis elegans
Exon144697   123   IV: 11507806-11507928 Caenorhabditis elegans
Exon144700   142   IV: 11508041-11508182 Caenorhabditis elegans
Exon144703   237   IV: 11508232-11508468 Caenorhabditis elegans
Exon144706   249   IV: 11508516-11508764 Caenorhabditis elegans
Exon144709   149   IV: 11508814-11508962 Caenorhabditis elegans
Exon144713   352   IV: 11509372-11509723 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M04B2.5a.1 11504716 11509723 1

1 Sequence

Length
2263

1 Sequence Ontology Term

Identifier Name Description
transcript