WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40F11.1.1 Sequence Name  F40F11.1.1
Length (nt)  542   Chromosome Location  IV: 11602641-11603280
Chromosome . Primary Identifier  IV Chromosome Location . Start  11602641
Chromosome Location . End  11603280 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40F11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004480 rps-11 F40F11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40F11.1 F40F11.1 468   IV: 11602652-11602789

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F40F11.1.1 11602641 11603280 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144910   149   IV: 11602641-11602789 Caenorhabditis elegans
Exon144911   206   IV: 11602842-11603047 Caenorhabditis elegans
Exon144912   187   IV: 11603094-11603280 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F40F11.1.1 11602641 11603280 1

1 Sequence

Length
542

1 Sequence Ontology Term

Identifier Name Description
transcript