WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y24F12A.1a.1 Sequence Name  Y24F12A.1a.1
Length (nt)  1557   Chromosome Location  IV: 11605254-11607528
Chromosome . Primary Identifier  IV Chromosome Location . Start  11605254
Chromosome Location . End  11607528 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y24F12A.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012496 Y24F12A.1 Y24F12A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y24F12A.1a Y24F12A.1a 1314   IV: 11605308-11605387

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y24F12A.1a.1 11605254 11607528 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144920   134   IV: 11605254-11605387 Caenorhabditis elegans
Exon144922   184   IV: 11605435-11605618 Caenorhabditis elegans
Exon144924   135   IV: 11605660-11605794 Caenorhabditis elegans
Exon144926   293   IV: 11605840-11606132 Caenorhabditis elegans
Exon144928   250   IV: 11606310-11606559 Caenorhabditis elegans
Exon144930   106   IV: 11606920-11607025 Caenorhabditis elegans
Exon144932   455   IV: 11607074-11607528 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y24F12A.1a.1 11605254 11607528 1

1 Sequence

Length
1557

1 Sequence Ontology Term

Identifier Name Description
transcript