WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F40F11.2 Sequence Name  F40F11.2
Length (nt)  4824   Chromosome Location  IV: 11594325-11594332
Chromosome . Primary Identifier  IV Chromosome Location . Start  11594325
Chromosome Location . End  11594332
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40F11.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28557 MIG-38 179.7 1607 Caenorhabditis elegans
 

Other

21 RNAi

WormBase ID
WBRNAi00046850
WBRNAi00099930
WBRNAi00100416
WBRNAi00091115
WBRNAi00071818
WBRNAi00100790
WBRNAi00101118
WBRNAi00071469
WBRNAi00099324
WBRNAi00099526
WBRNAi00099728
WBRNAi00100229
WBRNAi00065723
WBRNAi00111787
WBRNAi00100042
WBRNAi00117194
WBRNAi00008771
WBRNAi00100977
WBRNAi00025453
WBRNAi00100603
WBRNAi00101185

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F40F11.2 11594325 11594332 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009587 mig-38 F40F11.2 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:F40F11.2 11594325 11594332 1
CDS:F40F11.2 11594696 11594795 1
CDS:F40F11.2 11595310 11595531 1
CDS:F40F11.2 11595582 11595680 1
CDS:F40F11.2 11596180 11596408 1
CDS:F40F11.2 11596456 11596583 1
CDS:F40F11.2 11596638 11598021 1
CDS:F40F11.2 11598180 11598482 1
CDS:F40F11.2 11598530 11600649 1
CDS:F40F11.2 11600706 11600808 1
CDS:F40F11.2 11600928 11601055 1

1 Sequence

Length
4824

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F40F11.2.1 F40F11.2.1 5553   IV: 11594244-11601703